NIA Array Analysis

	Public Data Sets
	Description of NIA Array Analysis tool General description Input data format Gene annotations ANOVA Hierarchical clustering Principal Component Analysis (PCA/SVD/biplot) Pattern matching Download the latest version 2.0 Download arrayjoin tool (to parse multiple scanner files and combine results in one file)		False discovery rate (FDR) ANOVA with error variance correction 3D PCA/SVD-biplot PCA import for experiment comparison Pattern matching Optional permutation test Server-based software Reference: Sharov, A.A., Dudekula, D.B., Ko, M.S.H. 2005. A web-based tool for principal component and significance analysis of microarray data. Bioinformatics, 21(10): 2548-9. Epub 2005 Feb 25. PMID: 15734774
	Annotations (Mouse Development Oligo Microarray Version 3.0): Annotation File In Tab delimited Text Format (Size: 4MB) Annotation File In Excel Format (Size: 7.3MB) Annotation File In Excel Format With HyperLinks (Size: 29MB)
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