Alpha Cluster Sequences Data

Described in "Ko MSH, Kitchen JR, Wang X., Threat TA, Wang X, Hasegawa A, Sun T, Grahovac MJ, Kargul GJ, Lim MK, Cui Y, Sano Y, Tanaka T, Liang Y, Mason S, Paonessa PD, Sauls AD, DePalma GE, Sharara R, Rowe LB, Eppig J, Morrell C, Doi H (2000). Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment. Development 127, 1737-1749. [ Abs ] PDF"

Note: Original tables was generated before 2000. Current version of table was generated on 05/09/2007 by adding gene symbols for each Alpha cluster based on cluster member accession number match in NCBI Mouse UniGene Build #162

Cluster Name Gene Symbol(s) Unfertilized Fertilized 2-Cell 4-Cell 8-Cell 16-Cell Blastocyst
Alpha00001 Huwe1 0 0 0 0 0 0 3
Alpha00002   0 0 0 0 0 3 0
Alpha00003 Fbxo45 0 0 0 0 0 0 1
Alpha00004 Rpa1 0 0 1 0 0 0 0
Alpha00005 Hba-a1 3 4 6 1 0 7 122
Alpha00006 Cdc5l 0 1 0 0 1 1 3
Alpha00007 Fbxo8 0 1 3 0 0 0 0
Alpha00008 March7 0 1 1 1 1 0 0
Alpha00009   1 0 0 0 0 0 0
Alpha00010 Arpp19 0 1 0 0 0 0 0
Alpha00011 Aprt 0 2 0 1 0 2 2
Alpha00012 Wdr89 1 0 2 0 1 4 0
Alpha00013 Ttn 0 0 0 0 0 0 2
Alpha00014 EG666167,Ewsr1 0 0 2 2 1 0 0
Alpha00015 Reep1 0 1 0 0 0 0 2
Alpha00016 2310042E22Rik 0 0 0 0 0 0 1
Alpha00017 Lars 0 0 1 0 0 0 0
Alpha00018 Gyg 0 0 1 0 0 0 0
Alpha00019 Rpl9 0 1 0 6 3 1 3
Alpha00020 Ddb1 2 0 0 0 2 0 3
Alpha00021 Etfa 0 2 0 0 0 3 1
Alpha00022 Csda 0 0 0 0 0 6 2
Alpha00023   0 0 0 0 0 2 0
Alpha00024 Cstf1 0 0 0 0 2 0 1
Alpha00025 Gnai2 1 0 0 0 0 0 1
Alpha00026 AI987944 5 0 0 0 0 0 0
Alpha00027 Expi 0 0 0 1 0 0 0
Alpha00028 Jmjd1a 0 0 0 1 0 0 0
Alpha00029 LOC434459 0 2 0 0 0 1 0
Alpha00030 H3f3b 5 2 0 1 3 4 4
Alpha00031 Tax1bp1 2 1 0 0 4 0 0
Alpha00032 Rnf4 1 1 1 0 1 0 1
Alpha00033 4732495E13Rik 0 0 0 1 0 0 0
Alpha00034 Hbb-b1 1 3 4 1 0 2 78
Alpha00035 Map1lc3b 0 0 2 4 6 6 7
Alpha00036 Sssca1 0 0 0 0 0 2 0
Alpha00037 Brdt 0 0 1 0 0 0 0
Alpha00038 Hspa8,LOC669493 1 15 2 7 35 11 41
Alpha00039 Gltscr2 0 0 1 4 3 0 0
Alpha00040 Usp14 0 0 0 1 2 0 5
Alpha00041 Jarid2 0 0 0 0 0 0 4
Alpha00042 Pex19 0 1 0 1 0 0 0
Alpha00043 Sars2 0 1 0 0 0 0 1
Alpha00044 Gapdh,EG433273,LOC631594,EG382450 0 5 1 5 4 3 10
Alpha00045 Dnajc3 1 0 1 0 0 0 0
Alpha00046 Tax1bp3 0 0 0 0 1 0 2
Alpha00047 C030046E11Rik 1 0 0 0 0 0 0
Alpha00048   0 1 0 0 0 0 0
Alpha00049 Zfp57 0 3 0 0 0 3 0
Alpha00050 Gnas 4 1 2 0 0 2 1
Alpha00051 Erdr1 0 0 0 0 0 1 1
Alpha00052 Slc2a3 0 0 0 1 0 0 4
Alpha00053 Rps20 0 1 3 1 3 1 3
Alpha00054 EG668496 0 0 1 0 0 0 0
Alpha00055 1500015O10Rik 1 0 0 1 0 2 0
Alpha00056   0 0 0 0 0 0 2
Alpha00057 Rmnd5a 2 0 1 0 0 0 0
Alpha00058 Usp3 0 0 0 0 3 0 0
Alpha00059   0 0 0 0 0 1 0
Alpha00060 Rbpj 0 0 0 0 0 0 2
Alpha00061 4921513D23Rik 0 1 0 0 0 0 0
Alpha00062   39 79 93 78 81 65 44
Alpha00063 Eif4g2 2 1 4 0 7 4 1
Alpha00064 Rpl3 0 3 2 11 6 15 16
Alpha00065 Fbxl20 1 1 0 0 5 0 0
Alpha00066 Rpl10 0 4 1 5 3 21 14
Alpha00067 Csnk1a1 0 0 0 1 0 0 0
Alpha00068 Il4 2 0 0 0 0 0 0
Alpha00069 Foxn2 0 0 0 0 0 0 1
Alpha00070 Hnrpf 1 2 1 1 3 2 2
Alpha00071 Rpl15,Kalrn 0 2 1 0 5 9 6
Alpha00072 2410002O22Rik 0 0 1 0 0 0 0
Alpha00073 Dld 1 0 0 0 0 3 0
Alpha00074   0 0 0 0 0 2 0
Alpha00075 Actg1,EG545886 3 5 1 4 4 4 14
Alpha00076 Clstn2 0 0 0 0 0 0 1
Alpha00077 Cenpj 1 0 0 0 0 0 0
Alpha00078 Csnk1d 0 0 0 1 0 0 2
Alpha00079 BC002230 0 0 0 1 0 0 1
Alpha00080 Usp1 1 1 2 0 0 0 0
Alpha00081 Obox1,Obox2,Obox5 40 12 6 0 0 5 0
Alpha00082 Dse 0 1 0 0 0 0 0
Alpha00083 Atp11a 0 0 0 4 0 1 0
Alpha00084 Gprasp1 0 1 0 0 0 0 0
Alpha00085 Rab7 0 0 0 0 0 1 0
Alpha00086 Sdhb 0 0 0 0 0 0 2
Alpha00087 Wwp2 0 0 0 1 0 0 0
Alpha00088 Rpl32,Mtap7 1 1 1 1 3 1 8
Alpha00089 Rpl11 4 0 2 1 1 0 11
Alpha00090 Hnrpa1 1 0 0 0 1 0 0
Alpha00091 EG665239 0 0 0 0 0 2 0
Alpha00092 Rpl13 0 0 0 1 2 3 0
Alpha00093   40 64 102 79 53 102 48
Alpha00094 Ufd1l 0 0 0 0 0 0 1
Alpha00095 AU024076 9 4 2 0 0 0 0
Alpha00096 AW146299 0 5 0 0 0 1 0
Alpha00097 Myc 0 0 1 0 1 0 0
Alpha00098 Tuba1b,Tuba1c 1 1 1 3 0 0 5
Alpha00099 Tom1l2 0 0 0 2 0 0 0
Alpha00100   0 0 0 0 0 1 0
Alpha00101 6430548M08Rik 0 0 0 0 0 2 0
Alpha00102 Wasf2 0 0 0 0 0 0 3
Alpha00103   0 0 0 0 0 0 1
Alpha00104 Pfdn1 0 0 0 0 0 2 0
Alpha00105 Rpusd4 0 0 0 0 0 0 3
Alpha00106 Cdk9 0 1 0 0 0 2 1
Alpha00107 Ywhag 0 0 1 0 1 0 2
Alpha00108   1 0 0 0 0 0 0
Alpha00109 Prdx2 3 2 0 0 1 0 0
Alpha00110 Pigf 3 0 0 0 0 0 0
Alpha00111 Nrf1 0 3 0 0 0 0 0
Alpha00112 0610031J06Rik 1 2 1 1 0 0 14
Alpha00113 Rpl18a 0 1 2 8 1 6 9
Alpha00114 BC052040 0 0 0 0 0 1 0
Alpha00115 EG240110,Rpl29 0 1 0 1 3 2 10
Alpha00116 Ap2m1 0 0 0 1 1 0 4
Alpha00117 Thrap3 0 0 0 0 0 0 1
Alpha00118   0 1 0 0 0 0 0
Alpha00119 Eef1g 0 3 1 4 5 0 11
Alpha00120 Gpd2 0 0 1 0 3 0 0
Alpha00121 Btg1 0 0 2 0 0 0 0
Alpha00122 Unc84a 0 0 0 0 3 1 0
Alpha00123 Myohd1 0 0 0 0 1 0 0
Alpha00124   0 0 0 0 0 2 0
Alpha00125 Chmp2a 0 2 0 1 0 0 3
Alpha00126   0 0 0 2 0 0 0
Alpha00127 Hnrpa1 0 1 0 0 0 0 0
Alpha00128 Rspo2 0 2 0 0 0 0 0
Alpha00129 Sbno1 1 0 0 0 0 0 1
Alpha00130 Rpl13a,Tmem49 0 1 3 2 2 8 3
Alpha00131 Hsp90b1 0 1 4 3 0 2 1
Alpha00132   0 0 1 0 0 0 0
Alpha00133 Tbx20 0 0 0 0 2 0 0
Alpha00134 Snx9 1 0 2 0 0 0 0
Alpha00135 Snx5 0 0 0 0 2 0 0
Alpha00136 Hsp90ab1 0 0 1 0 15 5 11
Alpha00137 Ap3b1 0 0 0 0 0 1 2
Alpha00138 Rpl23 0 0 0 4 1 0 0
Alpha00139 Tk1 0 0 0 0 0 0 1
Alpha00140 Tbc1d23 1 0 3 0 0 3 0
Alpha00141 Eps15 0 1 0 1 0 0 0
Alpha00142   1 0 0 0 0 0 0
Alpha00143 Pja1 1 0 0 0 0 0 0
Alpha00144   0 1 0 0 0 0 0
Alpha00145 Banp 1 1 0 1 0 0 0
Alpha00146 Mmp23 0 1 0 0 0 0 0
Alpha00147   14 41 37 28 12 54 19
Alpha00148   0 1 0 0 0 0 0
Alpha00149 Cdv3 2 0 3 1 3 0 0
Alpha00150 AU020147 0 0 0 0 2 0 0
Alpha00151   1 0 0 0 0 0 0
Alpha00152 9430067K14Rik 0 1 0 0 0 0 0
Alpha00153 Srrm1 0 0 0 0 3 2 2
Alpha00154 Wdr75 0 0 0 0 0 0 1
Alpha00155 Eif2s1 1 0 0 0 1 0 0
Alpha00156 Cnot7 0 3 0 0 0 0 0
Alpha00157 Lct 0 0 0 0 0 0 1
Alpha00158 Morf4l1 3 0 1 1 0 0 1
Alpha00159   0 0 2 0 0 0 0
Alpha00160 Dom3z 0 0 0 0 0 2 0
Alpha00161   1 0 0 0 0 0 0
Alpha00162 Sp100 0 1 0 0 0 0 0
Alpha00163 Cd276 0 0 3 0 0 0 0
Alpha00164 4632434I11Rik 0 0 3 0 0 0 0
Alpha00165 Ppm1b 1 2 1 0 0 0 0
Alpha00166   0 0 0 3 0 0 0
Alpha00167 Peci 0 0 0 1 0 0 0
Alpha00168 Eef1b2 0 0 1 8 1 1 3
Alpha00169 Hexb 0 0 0 0 3 0 0
Alpha00170 Fxyd4 0 0 1 4 1 2 0
Alpha00171   0 0 0 1 0 0 0
Alpha00172 Nrm 0 0 0 0 0 1 0
Alpha00173   1 0 0 0 0 0 0
Alpha00174 Gstm1 0 2 1 9 0 2 0
Alpha00175 Hipk1 0 0 0 2 0 0 0
Alpha00176 Dgat1 0 0 0 0 0 0 4
Alpha00177 AA408296 1 0 0 0 0 0 0
Alpha00178 Dusp14 0 1 1 1 1 0 0
Alpha00179 Npm1,EG668347 1 2 1 1 1 1 5
Alpha00180   0 0 1 0 0 0 0
Alpha00181 Tbcb 0 0 0 1 2 0 0
Alpha00182 M6pr 0 0 1 0 0 0 0
Alpha00183 Ppp5c 0 0 0 0 1 0 0
Alpha00184 Hnrpa3 0 0 0 0 3 0 0
Alpha00185 Rpl41 0 0 2 6 5 6 2
Alpha00186 Rasd1 0 0 0 2 0 0 0
Alpha00187 C330007P06Rik 0 0 0 1 1 0 0
Alpha00188 Eif5 1 0 1 0 1 0 0
Alpha00189 Tomm70a 1 0 1 0 0 0 2
Alpha00190 AA388235 0 1 0 0 0 0 0
Alpha00191 Taf1 0 0 1 0 0 0 0
Alpha00192 Tmem50b 0 0 1 0 1 0 0
Alpha00193 Psmc5 2 0 0 1 3 0 5
Alpha00194 Eprs 0 0 0 2 0 5 1
Alpha00195 A830023I12Rik,Npm1 3 1 3 3 6 3 3
Alpha00196 Noc4l 0 0 0 0 1 0 0
Alpha00197   1 0 0 0 0 0 0
Alpha00198 Eif3s6 0 1 0 2 2 2 2
Alpha00199 Smpdl3b 0 0 0 0 0 6 0
Alpha00200 LOC554327 0 0 0 0 0 0 1
Alpha00201   0 0 0 0 0 0 1
Alpha00202 Mars 0 0 0 0 0 0 2
Alpha00203 Efemp2 0 0 0 1 0 0 0
Alpha00204 Tomm7 1 0 0 0 0 0 0
Alpha00205 Rpl5,LOC668936 0 2 1 9 2 3 17
Alpha00206 Pdk3 0 0 1 0 0 0 0
Alpha00207 Bms1l 0 0 0 0 2 2 0
Alpha00208   0 0 0 0 0 3 0
Alpha00209 5730536A07Rik,Cdkn2d 0 0 0 0 0 1 5
Alpha00210 Rps3a,1700016D06Rik 0 6 3 5 5 5 14
Alpha00211 Pfkfb3 0 0 0 0 1 0 0
Alpha00212   0 0 0 0 2 0 0
Alpha00213 C530043G21Rik 0 0 0 1 0 0 0
Alpha00214   1 0 0 0 0 0 0
Alpha00215 Mrps28,Ptma 0 1 5 0 12 2 6
Alpha00216 Rbm12 0 1 0 0 0 0 0
Alpha00217 Rfpl4 5 10 2 0 1 0 0
Alpha00218 Mcm6 0 0 0 0 2 0 1
Alpha00219 Tmem181 0 0 0 0 0 0 3
Alpha00220 Cfh 1 1 0 2 0 0 0
Alpha00221 Omt2a,Omt2b 11 5 14 0 0 6 0
Alpha00222 Bub3 0 0 0 0 0 2 0
Alpha00223   0 0 0 0 0 0 2
Alpha00224 Cand1 1 0 3 0 1 0 0
Alpha00225   0 0 0 0 3 0 0
Alpha00226 Hic2 0 0 0 0 0 2 0
Alpha00227 Hsp90aa1 1 0 0 0 0 0 2
Alpha00228 Tmem176b 0 0 0 4 0 0 0
Alpha00229 Fbxo15 0 0 1 0 14 2 2
Alpha00230 Ptp4a1 3 0 3 0 1 0 0
Alpha00231 Slc3a2 2 0 0 0 0 1 0
Alpha00232 Rpl7a,EG666669 2 1 1 8 7 2 4
Alpha00233 Rps16,Gpr133 0 1 0 0 2 4 6
Alpha00234 Bxdc2 5 1 1 1 0 0 1
Alpha00235 D15Ertd466e 0 1 0 0 0 0 0
Alpha00236 Ptplb 0 1 0 0 0 0 0
Alpha00237 LOC672743,Rps4x 0 1 4 6 5 13 10
Alpha00238 Rpl13a 2 0 0 0 2 0 1
Alpha00239 Lin7c 0 0 0 0 1 0 0
Alpha00240 Eef2,Sfi1 0 2 1 6 9 2 2
Alpha00241 D3Ertd300e 0 0 0 0 1 0 1
Alpha00242   0 0 0 0 0 0 1
Alpha00243 Lbr 0 0 1 0 0 0 0
Alpha00244 Timd2 0 0 0 0 6 3 1
Alpha00245 Hprt1 1 0 0 2 1 2 4
Alpha00246 Ifrg15 0 0 0 1 0 0 0
Alpha00247 Alg10b 0 0 0 0 0 2 0
Alpha00248 Eprs 3 0 0 0 0 0 3
Alpha00249   0 0 0 0 0 0 2
Alpha00250 AI314180 0 0 0 1 0 0 3
Alpha00251   1 0 0 0 0 0 0
Alpha00252 Bpgm 5 10 0 0 0 2 0
Alpha00253 1700106N22Rik 0 2 0 0 0 0 0
Alpha00254   0 0 1 0 0 0 0
Alpha00255 9530068E07Rik 0 1 0 0 0 2 0
Alpha00256 Hspa4 0 0 1 0 1 0 3
Alpha00257 Gcn5l2 0 1 0 0 0 0 1
Alpha00258 Nvl 0 0 0 0 0 0 1
Alpha00259 Got2 0 1 0 2 0 0 0
Alpha00260 Hsd17b4,Cd63 0 0 0 2 2 0 10
Alpha00261   1 0 0 0 0 0 0
Alpha00262 Rps14 0 0 0 4 0 3 5
Alpha00263 Fkbp3 0 0 0 0 2 0 1
Alpha00264 Nap1l4 0 2 0 1 2 2 0
Alpha00265   0 2 0 0 0 0 0
Alpha00266 Foxo1 4 0 0 0 0 0 0
Alpha00267 D12Ertd647e 0 0 1 1 0 0 0
Alpha00268 Med6 0 0 4 0 0 0 0
Alpha00269 Hras1 0 0 1 0 0 0 0
Alpha00270   0 0 0 1 0 0 0
Alpha00271 Rhbdf1 0 0 0 0 1 0 0
Alpha00272 Clk1 1 4 0 0 2 0 0
Alpha00273   0 0 0 0 1 0 0
Alpha00274 Ppp2r2b 0 0 1 0 0 0 0
Alpha00275 Ipo7 0 0 0 1 3 2 0
Alpha00276 Akp5 0 0 2 1 4 1 3
Alpha00277 Phf20 0 0 0 0 0 2 0
Alpha00278   1 0 0 0 0 0 0
Alpha00279   1 0 0 0 0 0 0
Alpha00280   3 6 0 0 0 0 0
Alpha00281 Papola 0 0 0 0 0 3 0
Alpha00282 Eif1b 3 0 0 0 0 0 0
Alpha00283 Ppp2r3c 0 0 0 0 0 0 2
Alpha00284 Ift52 0 0 1 0 0 0 0
Alpha00285 Atp5b,Smchd1 2 1 5 3 2 13 10
Alpha00286 Rhoa 2 0 0 0 2 0 0
Alpha00287 EG545878 0 0 0 0 2 0 0
Alpha00288 Tubb5 0 0 0 0 0 5 1
Alpha00289   0 0 0 0 2 0 0
Alpha00290 Cd24a 0 1 1 0 0 0 2
Alpha00291 1200015A19Rik 0 0 0 1 0 0 0
Alpha00292 Taf4b 0 0 0 0 1 0 1
Alpha00293 Acin1 0 0 0 0 0 1 2
Alpha00294 Arf1 1 3 1 0 5 4 8
Alpha00295   0 1 0 0 0 0 0
Alpha00296 Rpl17,Heph 0 5 1 7 1 2 7
Alpha00297 Ankrd17 0 0 0 0 0 0 1
Alpha00298 2610304G08Rik 4 66 7 5 11 3 251
Alpha00299 Map3k12,Pcbp2 1 0 1 0 0 1 1
Alpha00300 Gtf3c4 0 0 1 0 0 0 0
Alpha00301 Pla2g4c 0 3 0 0 0 4 0
Alpha00302 BC053393 0 0 0 0 0 0 2
Alpha00303 Rpl35a 0 0 0 1 0 0 3
Alpha00304 Cdc5l,LOC668205 0 0 0 0 0 0 3
Alpha00305 Rnf146 2 0 0 0 1 0 0
Alpha00306 Fkbp4 0 0 1 0 0 0 3
Alpha00307 Ap1g1 0 0 0 2 0 0 0
Alpha00308 Jarid2 0 0 0 0 3 0 0
Alpha00309 Ftsj3 0 1 0 0 0 2 0
Alpha00310 Lamb1-1 1 0 0 0 0 2 2