Secreted Proteins Help File

This file shows 1,843 sequences which contain some evidence of secreted protein motifs as determined by SignalP (http://www.cbs.dtu.dk/services/SignalP/).

SEQ_NAME sequence name.

NN_SMEAN mean S-score.

NN_SMEAN_STATUS indicates whether SignalP considers the sequence a ‘secreted protein.’ Values for this field are ‘Y’=Yes or null.

For details please see:

Neural network method for identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. H Nielsen, J Engelbrecht, S.Brunak and G von Heijne, Int. J. Neural Sys. 8, 581-599 (1997).

This file is structured to allow the user to combine this data with the data of the GeneID file by copying and pasting the desired columns. That is, we have included fields for all 15,247 clones, regardless of the existence of SignalP data.


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