List of TF binding sites
Format: name color site_list(comma separated) [second_list distance]
Parenthesis [...] indicate optional settings
oct yellow V$OCT1_04,V$OCT1_Q6,V$OCT_Q6,V$OCT1_Q5,V$OCT1_Q5_01 oct-sox red V$OCT1_04,V$OCT1_Q6,V$OCT_Q6,V$OCT1_Q5,V$OCT1_Q5_01 V$SRY_01,V$SRY_02 100

Colors to use: magenta, black, gray, blue, red, white, green, yellow, dark_red, ltgreen, greenblue.

500 1000 2000 5000 10000 20000 bp upstream transcription start
0 500 1000 2000 5000 10000 20000 bp downstream transcription start
500 1000 2000 5000 10000 20000 bp upstream transcription end
500 1000 2000 5000 10000 20000 bp downstream transcription end