NIA Mouse Gene Index 3.0
Download NIA Mouse Gene Index ver.3
Tables (MS Excel)
Table 1.
Genes in the mouse genome and their characteristics
Table 2.
Alternative transcription/splicing (ATS) sites in the mouse genome
U-clusters (gene loci)
Annotations
Field
annotations
Members and attributes
Field
annotations
Genes and attributes
Field
annotations
Exon scheme
Field
annotations
Virtual sequences (fasta)
Major transcripts for each gene
Field
annotations
Potentially wrong strand
Field
annotations
Transcripts
Annotations
Field
annotations
Sequences (fasta)
Members and attributes
Field
annotations
Genome alignment (BLAT-psl)
Field
annotations
Member alignment (BLAT-psl)
Field
annotations
ORF attributes
Field
annotations
ORF sequences (fasta)
Sequence repeats
Field
annotations
Comparison of UniGene, TIGR, and DoTS with NIA Gene Index
UniGene
TIGR gene index
DoTS gene index
Miscellaneous
Alignments deleted
Field
annotations
Alignments truncated
Field
annotations
Software for gene index assembly
Psl2gff Perl code to convert BLAT format to GFF
Gene Index Assembly Software (zipped)
Read-me file
