CisView: Mouse (mm6, March2005)

Transcription factor binding site ADD_HOGNESS

Source: Assembled from B1 repeats
TF group: HOGNESS
Pattern = GTGGTGGCGCACGCCTTTAATCCCAGCACT (core elements are bold)     Class: HOGNESS     Allowed mismatch:
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Position weight matrix:
positionACGT
1
30370
2
01039
3
00400
4
00400
5
00040
6
00400
7
00400
8
03406
9
112270
10
04000
11
40000
12
03505
13
60331
14
04000
15
04000
16
00040
17
00040
18
00040
19
40000
20
40000
21
00040
22
04000
23
04000
24
04000
25
40000
26
00400
27
04000
28
40000
29
04000
30
00040

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

Legend