CisView: Mouse (mm6, March2005)
Transcription factor binding site ADD_HOXA4

Source: Wu K, Wolgemuth DJ. 1993. Protein product of the somatic-type transcript of the Hoxa-4 (Hox-1.4) gene binds to homeobox consensus binding sites in its promoter and intron. J Cell Biochem. 52:449-62.
TF group: HOXA4       TFBS class: HOX = Homeobox       Code: 3.1.1.2.12
Pattern = CAATTAA     Class: HOXA4     Allowed mismatch: 0.2
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Genes (trans-elements):
U-clusterSymbol
Annotation
U027305Hoxa4homeo box A4

GO terms:
GO:0007275 development
GO:0007389 pattern specification
GO:0009887 organogenesis

Protein domains:
IPR001356 Homeobox
IPR000047 Helix-turn-helix motif, lambda-like repressor
IPR001827 Homeobox protein, antennapedia type
IPR009057 Homeodomain-like

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

Legend