CisView: Mouse (mm6, March2005)
Transcription factor binding site ADD_OCT4B

Source: Botquin V, Hess H, Fuhrmann G, Anastassiadis C, Gross MK, Vriend G, Scholer HR. 1998 New POU dimer configuration mediates antagonistic control of an osteopontin preimplantation enhancer by Oct-4 and Sox-2. Genes Dev. 12(13):2073-2090.
TF group: OCT       TFBS class: POU = Octamer (POU)       Code: 3.1.2
Pattern = ATTTGNNNNNCAAAT (used as matrix, core elements are bold)     Class: OCT     Allowed mismatch: 0.2     Palindrome
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Genes (trans-elements):
U-clusterSymbol
Annotation
U017906Pou5f1POU domain, class 5, transcription factor 1

Protein domains:
IPR007103 POU homeobox
IPR009057 Homeodomain-like
IPR001356 Homeobox
IPR010982 Lambda repressor-like, DNA-binding
IPR000327 POU

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

Legend