CisView: Mouse (mm6, March2005)
Transcription factor binding site ADD_SF1B

Source: Barnea E, Bergman Y. 2000. Synergy of SF1 and RAR in activation of Oct-3/4 promoter. J Biol Chem. 275:6608-19.
TF group: SF1       TFBS class: HR = Hormone receptor       Code: 2.1.3
Pattern = RRAGGTC     Class: SF1     Allowed mismatch: 0.2
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Genes (trans-elements):
U-clusterSymbol
Annotation
U038689Zfp162zinc finger protein 162

GO terms:
GO:0006397 mRNA processing
GO:0003723 RNA binding
GO:0004969 histamine receptor activity
GO:0005681 spliceosome complex
GO:0000398 nuclear mRNA splicing, via spliceosome
GO:0007186 G-protein coupled receptor protein signaling pathway

Protein domains:
IPR001093 IMP dehydrogenase/GMP reductase
IPR004088 KH, type 1
IPR003980 Histamine H3 receptor
IPR004087 KH
IPR001878 Zn-finger, CCHC type

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

Legend