TFBS = ADD_TANTIGEN

CisView: Mouse (mm6, March2005)

Transcription factor binding site ADD_TANTIGEN

Source: Assembled from B1 repeats
TF group: TANTIGEN
Pattern = GGAGGCAGAGGCAGGYGT (core elements are bold) Class: TANTIGEN Allowed mismatch: 0.2
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Position weight matrix:

position A C G T
1 0 0 40 0
2 0 0 40 0
3 40 0 0 0
4 0 0 40 0
5 0 0 40 0
6 0 40 0 0
7 40 0 0 0
8 0 0 40 0
9 40 0 0 0
10 0 0 40 0
11 0 0 40 0
12 0 40 0 0
13 40 0 0 0
14 0 0 40 0
15 0 0 40 0
16 6 15 1 18
17 5 1 34 0
18 1 0 0 39

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

position	A	C	G	T
1	0	0	40	0
2	0	0	40	0
3	40	0	0	0
4	0	0	40	0
5	0	0	40	0
6	0	40	0	0
7	40	0	0	0
8	0	0	40	0
9	40	0	0	0
10	0	0	40	0
11	0	0	40	0
12	0	40	0	0
13	40	0	0	0
14	0	0	40	0
15	0	0	40	0
16	6	15	1	18
17	5	1	34	0
18	1	0	0	39

Legend