CisView: Mouse (mm6, March2005)
Transcription factor binding site MIT_001NRF1

Source: Xie X, Lu J, Kulbokas EJ, Golub TR, Mootha V, Lindblad-Toh K, Lander ES, Kellis M. 2005. Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals. Nature 434(7031):338-345.
TF group: NRF1       TFBS class: bZIP = Leucine zipper       Code: 1.1
Pattern = RCGCANGCGY     Class: NRF1     Allowed mismatch: 0.2     Palindrome
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Genes (trans-elements):
U-clusterSymbol
Annotation
U006624Nrf1nuclear respiratory factor 1

GO terms:
GO:0007005 mitochondrion organization and biogenesis
GO:0005975 carbohydrate metabolism
GO:0005525 GTP binding

Protein domains:
IPR001093 IMP dehydrogenase/GMP reductase
IPR000577 Carbohydrate kinase, FGGY
IPR004396 Conserved hypothetical protein 92
IPR012676 TGS-like
IPR002100 Transcription factor, MADS-box

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

Legend