CisView: Mouse (mm6, March2005)

Transcription factor binding site MIT_006SP1

Source: Xie X, Lu J, Kulbokas EJ, Golub TR, Mootha V, Lindblad-Toh K, Lander ES, Kellis M. 2005. Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals. Nature 434(7031):338-345.
TF group: SP1       TFBS class: ZF = Zinc finger       Code: 2.3.1.0
Pattern = GGGCGGR     Class: SP1     Allowed mismatch: 0.2
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Genes (trans-elements):
U-clusterSymbol
Annotation
U043484Sp1trans-acting transcription factor 1
U033330Sp2Sp2 transcription factor
U022740Sp3trans-acting transcription factor 3
U034465Sp4trans-acting transcription factor 4

GO terms:
GO:0008270 zinc ion binding
GO:0003690 double-stranded DNA binding
GO:0016563 transcriptional activator activity
GO:0030217 T cell differentiation
GO:0008016 regulation of heart contraction rate
GO:0030218 erythrocyte differentiation
GO:0030851 granulocyte differentiation
GO:0030224 monocyte differentiation
GO:0003713 transcription coactivator activity
GO:0030183 B cell differentiation
GO:0003682 chromatin binding
GO:0001779 natural killer cell differentiation
GO:0016564 transcriptional repressor activity

Protein domains:
IPR001093 IMP dehydrogenase/GMP reductase
IPR007087 Zn-finger, C2H2 type

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

Legend