CisView: Mouse (mm6, March2005)
Transcription factor binding site MIT_023CHX

Source: Xie X, Lu J, Kulbokas EJ, Golub TR, Mootha V, Lindblad-Toh K, Lander ES, Kellis M. 2005. Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals. Nature 434(7031):338-345.
TF group: CHX10
Pattern = TAATTA     Class: CHX10     Allowed mismatch: 0.2     Palindrome
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Genes (trans-elements):
U-clusterSymbol
Annotation
U014197Chx10C. elegans ceh-10 homeo domain containing homolog

GO terms:
GO:0001747 eye morphogenesis (sensu Mammalia)
GO:0007275 development
GO:0045165 cell fate commitment

Protein domains:
IPR006209 EGF-like
IPR009057 Homeodomain-like
IPR001093 IMP dehydrogenase/GMP reductase
IPR001356 Homeobox
IPR007104 Paired-like homeobox
IPR003654 Paired-like homeodomain protein, OAR

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

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