CisView: Mouse (mm6, March2005)
Transcription factor binding site MIT_044OCT

Source: Xie X, Lu J, Kulbokas EJ, Golub TR, Mootha V, Lindblad-Toh K, Lander ES, Kellis M. 2005. Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals. Nature 434(7031):338-345.
TF group: OCT       TFBS class: POU = Octamer (POU)       Code: 3.1.2
Pattern = YATGNWAAT     Class: OCT     Allowed mismatch: 0.2
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Genes (trans-elements):
U-clusterSymbol
Annotation
U022001Pou2f1POU domain, class 2, transcription factor 1

GO terms:
GO:0016481 negative regulation of transcription

Protein domains:
IPR009057 Homeodomain-like
IPR000972 Octamer-binding transcription factor
IPR010982 Lambda repressor-like, DNA-binding
IPR000327 POU
IPR001093 IMP dehydrogenase/GMP reductase
IPR007103 POU homeobox
IPR001356 Homeobox

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

Legend