CisView: Mouse (mm6, March2005)
Transcription factor binding site MIT_058IPF1

Source: Xie X, Lu J, Kulbokas EJ, Golub TR, Mootha V, Lindblad-Toh K, Lander ES, Kellis M. 2005. Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals. Nature 434(7031):338-345.
TF group: IPF1       TFBS class: HOX = Homeobox       Code: 3.1.1.2.27
Pattern = YCATTAA     Class: IPF1     Allowed mismatch: 0.2
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Genes (trans-elements):
U-clusterSymbol
Annotation
U006444Ipf1insulin promoter factor 1, homeodomain transcription factor

GO terms:
GO:0006006 glucose metabolism
GO:0042127 regulation of cell proliferation
GO:0007275 development
GO:0016563 transcriptional activator activity

Protein domains:
IPR000047 Helix-turn-helix motif, lambda-like repressor
IPR009057 Homeodomain-like
IPR001356 Homeobox
IPR001827 Homeobox protein, antennapedia type

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

Legend