CisView: Mouse (mm6, March2005)
Transcription factor binding site MIT_108FAC1

Source: Xie X, Lu J, Kulbokas EJ, Golub TR, Mootha V, Lindblad-Toh K, Lander ES, Kellis M. 2005. Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals. Nature 434(7031):338-345.
TF group: FAC1       TFBS class: ZF = Zinc finger       Code: 2.3
Pattern = AACWWCAANK     Class: FAC1     Allowed mismatch: 0.2
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Genes (trans-elements):
U-clusterSymbol
Annotation
U041151Falzfetal Alzheimer antigen

Protein domains:
IPR001965 Zn-finger-like, PHD finger
IPR006209 EGF-like
IPR011009 Protein kinase-like
IPR001487 Bromodomain
IPR001093 IMP dehydrogenase/GMP reductase
IPR001510 Zn-finger, NAD(+) ADP-ribosyltransferase
IPR011011 FYVE/PHD zinc finger
IPR004022 DDT

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

Legend