CisView: Mouse (mm6, March2005)
Transcription factor binding site MIT_139FOXJ1

Source: Xie X, Lu J, Kulbokas EJ, Golub TR, Mootha V, Lindblad-Toh K, Lander ES, Kellis M. 2005. Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals. Nature 434(7031):338-345.
TF group: FOXJ1       TFBS class: FH = Fork head       Code: 3.3
Pattern = AAAYWAACM     Class: FOXJ1     Allowed mismatch: 0.2
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Genes (trans-elements):
U-clusterSymbol
Annotation
U009892Foxf1aforkhead box F1a
U085978Foxj1forkhead box J1

GO terms:
GO:0001570 vasculogenesis
GO:0030324 lung development
GO:0042384 cilium biogenesis
GO:0007389 pattern specification
GO:0009887 organogenesis
GO:0035089 establishment of apical/basal cell polarity

Protein domains:
IPR001766 Fork head transcription factor

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

Legend