CisView: Mouse (mm6, March2005)
Transcription factor binding site TF_ATF6

Database: TRANSFAC
Source: Matys V, Fricke E, Geffers R, Gößling E, Haubrock M, et al. 2003. TRANSFAC: transcriptional regulation, from patterns to profiles. Nucleic Acids Res., 31, 374-378.
TF group: ATF6       TFBS class: bZIP = Leucine zipper       Code: 1.1.1.1.1
Pattern = MCACGTCA (core elements are bold)     Class: ATF6     Allowed mismatch: 0.16
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Matrixes from TRANSFAC:
Matrix
Pattern
Orientation
V$XBP1_01 ASNNNMCACGTCANCNN
-
V$ATF6_01 _____CCACGTCA
-

Genes (trans-elements):
U-clusterSymbol
Annotation
U022038Atf6activating transcription factor 6

GO terms:
GO:0005783 endoplasmic reticulum
GO:0005641 nuclear membrane lumen
GO:0005654 nucleoplasm
GO:0006986 response to unfolded protein
GO:0007165 signal transduction
GO:0005635 nuclear membrane
GO:0006457 protein folding
GO:0003713 transcription coactivator activity
GO:0006950 response to stress
GO:0006990 unfolded protein response, positive regulation of target gene transcription
GO:0005789 endoplasmic reticulum membrane

Protein domains:
IPR011616 bZIP transcription factor, bZIP_1
IPR001093 IMP dehydrogenase/GMP reductase
IPR004827 Basic-leucine zipper (bZIP) transcription factor
IPR008917 Eukaryotic transcription factor, DNA-binding

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

Legend