CisView: Mouse (mm6, March2005)
Transcription factor binding site TF_EVI

Database: TRANSFAC
Source: Matys V, Fricke E, Geffers R, Gößling E, Haubrock M, et al. 2003. TRANSFAC: transcriptional regulation, from patterns to profiles. Nucleic Acids Res., 31, 374-378.
TF group: EVI       TFBS class: ZF = Zinc finger       Code: 2.3.2.2.8
Pattern = AGAYAAGATAA (core elements are bold)     Class: EVI     Allowed mismatch: 0.188
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Matrixes from TRANSFAC:
Matrix
Pattern
Orientation
V$EVI1_06 __ACAAGATAA
+
V$EVI1_01 WGAYAAGATAAGATAA
+
V$EVI1_02 AGAYAAGATAA
+
V$EVI1_03 AGATAAGATAA
+
V$EVI1_04 DGATADGAHWAGATA
+
V$EVI1_05 AGATAAGATAN
+

Genes (trans-elements):
U-clusterSymbol
Annotation
U023905Evi1,Mds1ecotropic viral integration site 1

GO terms:
GO:0007275 development
GO:0008270 zinc ion binding

Protein domains:
IPR003006 Immunoglobulin/major histocompatibility complex
IPR007087 Zn-finger, C2H2 type
IPR001093 IMP dehydrogenase/GMP reductase
IPR001214 Nuclear protein SET

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

Legend