CisView: Mouse (mm6, March2005)
Transcription factor binding site TF_FAC1

Database: TRANSFAC
Source: Matys V, Fricke E, Geffers R, Gößling E, Haubrock M, et al. 2003. TRANSFAC: transcriptional regulation, from patterns to profiles. Nucleic Acids Res., 31, 374-378.
TF group: FAC1       TFBS class: ZF = Zinc finger       Code: 2.3
Pattern = CAMAACA (core elements are bold)     Class: FAC1     Allowed mismatch: 0.017
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Matrixes from TRANSFAC:
Matrix
Pattern
Orientation
V$FAC1_01 NNNCAMAACACRNA
+

Genes (trans-elements):
U-clusterSymbol
Annotation
U041151Falzfetal Alzheimer antigen

Protein domains:
IPR001965 Zn-finger-like, PHD finger
IPR006209 EGF-like
IPR011009 Protein kinase-like
IPR001487 Bromodomain
IPR001093 IMP dehydrogenase/GMP reductase
IPR001510 Zn-finger, NAD(+) ADP-ribosyltransferase
IPR011011 FYVE/PHD zinc finger
IPR004022 DDT

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

Legend