Matrixes from TRANSFAC:

Matrix	Pattern	Orientation
V$FOXD3_01	____AAAYAAACAST	-
V$XFD1_01	___YAWGTAAATAW	+
V$XFD2_01	___WNTATAAACAW	+
V$FOXJ2_01	NNNWAAAYAAAYANNNNN	+

Genes (trans-elements):

U-cluster	Symbol	Annotation
U003222	Foxo1	forkhead box O1
U004533	Foxd3	forkhead box D3
U007379	Foxj2	forkhead box J2
U007443	Foxm1	Mus musculus forkhead box M1 (Foxm1), mRNA.
U009892	Foxf1a	forkhead box F1a
U009894	Foxc2	forkhead box C2
U014700	Foxf2	forkhead box F2
U031728	Foxo3a	forkhead box O3a
U085978	Foxj1	forkhead box J1
U104954	Foxe1	forkhead box E1 (thyroid transcription factor 2)
U123214	Foxh1	forkhead box H1
U132856	Foxo6	forkhead box O6
U297732	Foxn2	forkhead box N2
U322265	Foxk1	forkhead box K1

GO terms:
GO:0042127 regulation of cell proliferation
GO:0001570 vasculogenesis
GO:0001568 blood vessel development
GO:0030324 lung development
GO:0009952 anterior/posterior pattern formation
GO:0007368 determination of left/right symmetry
GO:0006917 induction of apoptosis
GO:0001889 liver development
GO:0007275 development
GO:0042384 cilium biogenesis
GO:0045648 positive regulation of erythrocyte differentiation
GO:0008286 insulin receptor signaling pathway
GO:0007389 pattern specification
GO:0001556 oocyte maturation
GO:0005624 membrane fraction
GO:0009887 organogenesis
GO:0000004 biological process unknown
GO:0003713 transcription coactivator activity
GO:0042593 glucose homeostasis
GO:0001544 initiation of primordial ovarian follicle growth
GO:0006915 apoptosis
GO:0035054 embryonic heart tube anterior/posterior pattern formation
GO:0031069 hair follicle morphogenesis
GO:0001542 ovulation (sensu Mammalia)
GO:0016563 transcriptional activator activity
GO:0001547 antral ovarian follicle growth
GO:0035089 establishment of apical/basal cell polarity
GO:0006974 response to DNA damage stimulus

Protein domains:
IPR001766 Fork head transcription factor
IPR001093 IMP dehydrogenase/GMP reductase
IPR011009 Protein kinase-like

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

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