CisView: Mouse (mm6, March2005)
Transcription factor binding site TF_GABP

Database: TRANSFAC
Source: Matys V, Fricke E, Geffers R, Gößling E, Haubrock M, et al. 2003. TRANSFAC: transcriptional regulation, from patterns to profiles. Nucleic Acids Res., 31, 374-378.
TF group: GABP       TFBS class: MYB/ETS = Tryptophan clusters       Code: 3.5.2.0.12
Pattern = ACCGGAAG (core elements are bold)     Class: GABP     Allowed mismatch: 0.12
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Matrixes from TRANSFAC:
Matrix
Pattern
Orientation
V$NRF2_01 ACCGGAAGNG
+

Genes (trans-elements):
U-clusterSymbol
Annotation
U024357Gabpb2GA repeat binding protein, beta 2
U040971Gabpb1GA repeat binding protein, beta 1
U043544GabpaGA repeat binding protein, alpha

GO terms:
GO:0042803 protein homodimerization activity

Protein domains:
IPR001093 IMP dehydrogenase/GMP reductase
IPR002110 Ankyrin
IPR000418 Ets
IPR003118 Sterile alpha motif/pointed
IPR010993 Sterile alpha motif homology
IPR002035 von Willebrand factor, type A
IPR002341 HSF/ETS, DNA-binding

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

Legend