CisView: Mouse (mm6, March2005)
Transcription factor binding site TF_GFI

Database: TRANSFAC
Source: Matys V, Fricke E, Geffers R, Gößling E, Haubrock M, et al. 2003. TRANSFAC: transcriptional regulation, from patterns to profiles. Nucleic Acids Res., 31, 374-378.
TF group: GFI       TFBS class: ZF = Zinc finger       Code: 2.3.2.4.1
Pattern = YAAATCACWGY (core elements are bold)     Class: GFI     Allowed mismatch: 0.072
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Matrixes from TRANSFAC:
Matrix
Pattern
Orientation
V$GFI1_01 NNNNNNNAAATCACWGYNNNNNNN
+

Genes (trans-elements):
U-clusterSymbol
Annotation
U022451Gfi1bgrowth factor independent 1B

GO terms:
GO:0008270 zinc ion binding

Protein domains:
IPR007087 Zn-finger, C2H2 type
IPR007086 Zn-finger, C2H2 subtype

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

Legend