CisView: Mouse (mm6, March2005)
Transcription factor binding site TF_HFH

Database: TRANSFAC
Source: Matys V, Fricke E, Geffers R, Gößling E, Haubrock M, et al. 2003. TRANSFAC: transcriptional regulation, from patterns to profiles. Nucleic Acids Res., 31, 374-378.
TF group: HFH       TFBS class: FH = Fork head       Code: 3.3.0.0.11
Pattern = TGTTTRTWTR (core elements are bold)     Class: HFH     Allowed mismatch: 0.09
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Matrixes from TRANSFAC:
Matrix
Pattern
Orientation
V$HFH1_01 NATTGTTTATWT
+
V$HFH3_01 KNNTRTTTRTTTA
+
V$HFH8_01 NNNTGTTTATNTR
+

Genes (trans-elements):
U-clusterSymbol
Annotation
U009892Foxf1aforkhead box F1a

GO terms:
GO:0001570 vasculogenesis
GO:0030324 lung development
GO:0009887 organogenesis

Protein domains:
IPR001766 Fork head transcription factor

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

Legend