CisView: Mouse (mm6, March2005)
Transcription factor binding site TF_MEF2

Database: TRANSFAC
Source: Matys V, Fricke E, Geffers R, Gößling E, Haubrock M, et al. 2003. TRANSFAC: transcriptional regulation, from patterns to profiles. Nucleic Acids Res., 31, 374-378.
TF group: MEF2       TFBS class: MADS = MADS box       Code: 4.4.1.1
Pattern = CTAWAAATAGM (core elements are bold)     Class: MEF2     Allowed mismatch: 0.193     Palindrome
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Matrixes from TRANSFAC:
Matrix
Pattern
Orientation
V$MEF2_01 _____CTCTAAAAATAACY
+
V$RSRFC4_01 ____NSKCTASAAATAGM
-
V$MEF2_02 NNNNNNKCTAWAAATAGMNNNN
+
V$MEF2_03 NNNNNWKCTAWAAATAGMNNNN
+
V$MEF2_04 NNTGTTACTAAAAATAGAAMNN
+

Genes (trans-elements):
U-clusterSymbol
Annotation
U015066Mef2cmyocyte enhancer factor 2C
U028686Mef2amyocyte enhancer factor 2A

GO terms:
GO:0007399 neurogenesis
GO:0003713 transcription coactivator activity
GO:0007517 muscle development

Protein domains:
IPR002100 Transcription factor, MADS-box
IPR001093 IMP dehydrogenase/GMP reductase

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

Legend