CisView: Mouse (mm6, March2005)
Transcription factor binding site TF_NRSF

Database: TRANSFAC
Source: Matys V, Fricke E, Geffers R, Gößling E, Haubrock M, et al. 2003. TRANSFAC: transcriptional regulation, from patterns to profiles. Nucleic Acids Res., 31, 374-378.
TF group: NRSF       TFBS class: ZF = Zinc finger       Code: 2.3.2.2.14
Pattern = GCKCTGTCCGTGGTGCTGAA (core elements are bold)     Class: NRSF     Allowed mismatch: 0.2
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Matrixes from TRANSFAC:
Matrix
Pattern
Orientation
V$NRSF_01 GGCKCTGTCCGTGGTGCTGAA
-

Genes (trans-elements):
U-clusterSymbol
Annotation
U042648RestMus musculus RE1-silencing transcription factor (Rest), mRNA.

GO terms:
GO:0008270 zinc ion binding
GO:0045892 negative regulation of transcription, DNA-dependent
GO:0016564 transcriptional repressor activity
GO:0017053 transcriptional repressor complex

Protein domains:
IPR007087 Zn-finger, C2H2 type

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

Legend