CisView: Mouse (mm6, March2005)
Transcription factor binding site TF_PAX4

Database: TRANSFAC
Source: Matys V, Fricke E, Geffers R, Gößling E, Haubrock M, et al. 2003. TRANSFAC: transcriptional regulation, from patterns to profiles. Nucleic Acids Res., 31, 374-378.
TF group: PAX4       TFBS class: PAX = Paired box       Code: 3.2.1.0.7.1
Pattern = BVGTCAWGCGTGH (core elements are bold)     Class: PAX4     Allowed mismatch: 0.15
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Matrixes from TRANSFAC:
Matrix
Pattern
Orientation
V$PAX4_01 NGNVGTCANGCGTGNNSNNYN
+

Genes (trans-elements):
U-clusterSymbol
Annotation
U027102Pax4paired box gene 4

GO terms:
GO:0030154 cell differentiation
GO:0007275 development
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
GO:0009887 organogenesis
GO:0045597 positive regulation of cell differentiation
GO:0045595 regulation of cell differentiation

Protein domains:
IPR009057 Homeodomain-like
IPR001356 Homeobox
IPR007104 Paired-like homeobox
IPR001523 Paired box protein, N-terminal

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

Legend