CisView: Mouse (mm6, March2005)
Transcription factor binding site TF_RP58

Database: TRANSFAC
Source: Matys V, Fricke E, Geffers R, Gößling E, Haubrock M, et al. 2003. TRANSFAC: transcriptional regulation, from patterns to profiles. Nucleic Acids Res., 31, 374-378.
TF group: RP58       TFBS class: CH+BTB/POZ
Pattern = AACATCTGG (core elements are bold)     Class: RP58     Allowed mismatch: 0.155
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Matrixes from TRANSFAC:
Matrix
Pattern
Orientation
V$RP58_01 NNAACATCTGGA
+

Genes (trans-elements):
U-clusterSymbol
Annotation
U022792Rp26retinitis pigmentosa 26

GO terms:
GO:0006508 proteolysis and peptidolysis
GO:0007205 protein kinase C activation
GO:0004143 diacylglycerol kinase activity
GO:0004182 carboxypeptidase A activity

Protein domains:
IPR001206 Diacylglycerol kinase, catalytic region
IPR001093 IMP dehydrogenase/GMP reductase
IPR000834 Peptidase M14, carboxypeptidase A

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

Legend