CisView: Mouse (mm6, March2005)
Transcription factor binding site TF_TGIF

Database: TRANSFAC
Source: Matys V, Fricke E, Geffers R, Gößling E, Haubrock M, et al. 2003. TRANSFAC: transcriptional regulation, from patterns to profiles. Nucleic Acids Res., 31, 374-378.
TF group: TGIF       TFBS class: HOX = Homeobox       Code: 3.1.1
Pattern = AGCTGTCANDA (core elements are bold)     Class: TGIF     Allowed mismatch: 0.091
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Matrixes from TRANSFAC:
Matrix
Pattern
Orientation
V$TGIF_01 AGCTGTCANNA
+

Genes (trans-elements):
U-clusterSymbol
Annotation
U038033TgifTG interacting factor

Protein domains:
IPR009057 Homeodomain-like
IPR001356 Homeobox

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

Legend