Overlap of ADD_FOXJ1 with other TFBS and distance distribution

CisView Mouse (mm6, March 2005)

Overlap of ADD_FOXJ1 with other TFBS

No.	TF2	N overlap	Overlap, %	Overlap in random seq., %	Abundance of ADD_FOXJ1	Abundance of TF2
1	MIT_060FOXO	62862	73.16	58.39	85923	148519
2	TF_SRY	58576	68.17	51.46	85923	85717
3	TF_FOXD	38472	44.77	26.79	85923	93909
4	TF_HFH	33362	38.82	26.2	85923	70651
5	TF_HNF3	32230	37.51	15.33	85923	115315
6	MIT_083HNF3	32224	37.5	24.03	85923	60354
7	MIT_139FOXJ1	22792	26.52	9.27	85923	26302
8	ADD_FOXP1	22243	25.88	15.85	85923	74510
9	ADD_FOXJ1	19775	23.01	3.02	85923	85923
10	TF_FOXO	15806	18.39	21.32	85923	61084
11	ADD_HMG	9146	10.64	12.45	85923	153281
12	MIT_013LEF	8649	10.06	12.23	85923	94229
13	TF_XVENT	8488	9.87	9.71	85923	52087
14	MIT_036FOXO	8310	9.67	9.38	85923	47427
15	ADD_SOX18	8178	9.51	11.52	85923	29857
16	ADD_SOX	5807	6.75	8.03	85923	9555
17	MIT_155	4952	5.76	5.68	85923	61850
18	ADD_PIT	4892	5.69	4.22	85923	353844

Over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	MIT_083HNF3	10 - 14	+a+b	3005	533	5.637	0.8	2.3	25.517	0	0
2	MIT_169	85 - 89	+a+b	44	12	3.666	1.1	1.6	7.824	0	0
3	TF_SRY	10 - 14	+a-b	6018	1424.4	4.224	1.1	1.8	6.03	0	0
4	MIT_066	45 - 49	-b+a	35	11.3	3.097	1.5	0.4	5.88	0	0
5	MIT_095	95 - 99	-b+a	31	13.2	2.348	1	0.9	5.204	0	0

Repeat-based over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	MIT_010YY1	30 - 34	+a+b	31	6.7	4.626	0.7	38	11.876	0	0
2	MIT_027	80 - 84	-b+a	51	23.4	2.179	0.8	23.6	6.389	0	0
3	ADD_FOXP3	10 - 14	+b+a	87	31.6	2.753	0.7	2.8	5.802	0	0
4	MIT_005NFY	85 - 89	+b+a	53	25.2	2.103	1.3	16.2	6.135	0	0
5	MIT_046	85 - 89	+b+a	65	31.4	2.07	0.9	13.4	5.44	0	0

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