Overlap of ADD_GCM with other TFBS and distance distribution

CisView Mouse (mm6, March 2005)

Overlap of ADD_GCM with other TFBS

No.	TF2	N overlap	Overlap, %	Overlap in random seq., %	Abundance of ADD_GCM	Abundance of TF2
1	TF_HOXA5	728	6.83	5.27	10645	43053

Over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	ADD_LXR1	30 - 34	+a-b	43	1.9	22.631	1.4	1	17.125	0	0
2	TF_RFX1	25 - 29	+a+b	56	14	4	1.1	0.8	7.427	0	0
3	MIT_076AREB6	5 - 9	+a-b	35	11.1	3.153	1.1	1	5.199	0	0
4	TF_HNF1	30 - 34	+a-b	50	14.4	3.472	0.8	1.6	5.284	0	0
5	TF_COUP	15 - 19	+a-b	33	12.7	2.598	1.1	0.9	4.164	0.0001	0.0003

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