Overlap of ADD_LXR1 with other TFBS and distance distribution

CisView Mouse (mm6, March 2005)

Overlap of ADD_LXR1 with other TFBS

No.	TF2	N overlap	Overlap, %	Overlap in random seq., %	Abundance of ADD_LXR1	Abundance of TF2
1	TF_RORA	930	16.79	13.68	5538	49245
2	MIT_025SF1	659	11.89	8.11	5538	37697
3	TF_ER	613	11.06	10.22	5538	48303
4	TF_HLF	554	10	6.97	5538	55513
5	TF_HNF1	476	8.59	4.53	5538	66746
6	ADD_SF1B	465	8.39	8.79	5538	48790
7	TF_MEIS	416	7.51	5.69	5538	79728
8	TF_CDC5	338	6.1	4.05	5538	49144
9	ADD_PIT	335	6.04	4.28	5538	353844

Over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	ADD_LXR1	40 - 44	+a+b	56	3.7	15.135	0.6	0.3	21.794	0	0
2	ADD_GCM	30 - 34	+a-b	43	1.9	22.631	1.4	1	17.125	0	0
3	TF_HNF1	40 - 44	+a+b	56	13.4	4.179	1.4	1.1	3.342	0.0133	0.0235
4	TF_RFX1	115 - 119	-b+a	45	9.4	4.787	1.2	0.5	3.576	0.016	0.0283
5	TF_MEIS	45 - 49	+a-b	57	15.3	3.725	1	0.9	3.266	0.0196	0.0342

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