Overlap of ADD_OCT4B with other TFBS and distance distribution

CisView Mouse (mm6, March 2005)

Overlap of ADD_OCT4B with other TFBS

No.	TF2	N overlap	Overlap, %	Overlap in random seq., %	Abundance of ADD_OCT4B	Abundance of TF2
1	ADD_PIT	3461	13.06	7.44	26482	353844
2	TF_XVENT	2651	10.01	9.49	26482	52087
3	MIT_060FOXO	2159	8.15	5.33	26482	148519
4	ADD_HMG	1931	7.29	4.54	26482	153281
5	TF_OCT	1923	7.26	4.47	26482	71983
6	ADD_FOXJ1	1608	6.07	4.15	26482	85923
7	MIT_073LEF	1466	5.53	3.58	26482	83859
8	TF_SRY	1441	5.44	3.38	26482	85717

Over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	MIT_174	80 - 84	-b+a	86	33.4	2.574	0.9	1.2	7.507	0	0
2	MIT_131GATA	95 - 99	+b+a	30	9.3	3.225	1.4	0.4	6.856	0	0
3	TF_HNF1	55 - 59	+a-b	94	45	2.088	1	0.9	6.301	0	0
4	MIT_170	60 - 64	+b+a	54	25.6	2.109	0.9	1.5	4.843	0	0

Repeat-based over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	TF_AP2A	35 - 39	+b+a	32	13.3	2.406	1	19.2	6.074	0	0
2	ADD_MEF3	90 - 94	+a-b	38	15.4	2.467	1	12.7	5.537	0	0

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