CisView Mouse (mm6, March 2005)

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Overlap of ADD_PITX with other TFBS

Over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	TF_ZIC	105 - 109	+b+a	44	16.3	2.699	1	0.9	8.863	0	0
2	MIT_044OCT	5 - 9	-b+a	77	24.7	3.117	1.4	1.4	7.162	0	0
3	MIT_040STAT	20 - 24	+a+b	34	12.6	2.698	1	1.4	4.914	0	0

Repeat-based over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	ADD_TANTIGEN	20 - 24	+a+b	336	6.1	55.081	0	207.3	184.585	0	0
2	NCBI_003	40 - 44	+a-b	133	1	133	0	482.9	131.276	0	0
3	ADD_FXRDR3	75 - 79	+b+a	123	10.5	11.714	0.8	57.3	37.307	0	0
4	MIT_031	15 - 19	+b+a	119	6.9	17.246	0.8	219.3	34.133	0	0
5	TF_LYF	10 - 14	+a+b	207	26	7.961	0.9	237.1	26.93	0	0
6	TF_AHR	5 - 9	-b+a	223	36.8	6.059	0.9	119.2	26.386	0	0
7	TF_STAT	70 - 74	+a-b	169	34.1	4.956	1	103.2	18.336	0	0
8	TF_E47	25 - 29	+a+b	103	21.8	4.724	0.9	54.5	13.233	0	0
9	ADD_TBX5	5 - 9	-b+a	68	16.4	4.146	1	67.3	12.379	0	0
10	TF_STAF	15 - 19	-b+a	83	31	2.677	1	39.9	10.68	0	0
11	MIT_013LEF	60 - 64	+a-b	154	70	2.2	0.8	35.1	8.405	0	0
12	MIT_012MYOD	25 - 29	+a+b	130	48.1	2.702	0.9	40.9	8.287	0	0
13	TF_MYC	5 - 9	+a-b	96	25.2	3.809	1.7	5.4	8	0	0
14	ADD_CIZ	110 - 114	+b+a	35	14	2.5	1	33.1	7.958	0	0
15	ADD_GCNF	40 - 44	+b+a	114	46.2	2.467	0.8	25.3	7.563	0	0
16	ADD_SF1A	40 - 44	+a+b	49	9.1	5.384	0.9	62.7	7.42	0	0

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