Overlap of ADD_PU1 with other TFBS and distance distribution

CisView Mouse (mm6, March 2005)

Overlap of ADD_PU1 with other TFBS

No.	TF2	N overlap	Overlap, %	Overlap in random seq., %	Abundance of ADD_PU1	Abundance of TF2
1	MIT_024MAZ	12168	11.94	10.06	101868	69348
2	MIT_050PU1	9338	9.16	8.03	101868	18987
3	TF_NFAT	5650	5.54	5.53	101868	26631

Over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	MIT_098	60 - 64	-b+a	37	13.2	2.803	0.7	0.7	7.016	0	0
2	TF_PPAR1	55 - 59	-b+a	31	13.9	2.23	1	1	5.493	0	0
3	TF_PPAR	35 - 39	+a+b	47	21.2	2.216	1.1	1.1	4.989	0	0

Repeat-based over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	MIT_065FXR	5 - 9	+a+b	31	4.2	7.38	1.2	8	11.624	0	0
2	MIT_169	45 - 49	+a-b	31	14.3	2.167	1.1	4	3.899	0.0017	0.0031

Legend