CisView Mouse (mm6, March 2005)

Overlap of ADD_SMAD3B with other TFBS

No.TF2N overlapOverlap, %Overlap in
random seq., %
Abundance
of ADD_SMAD3B
Abundance
of TF2
1MIT_154
2318
18.39
0.71
12604
7933
2TF_TAL1
639
5.06
4.26
12604
49913

Over-represented distances with other TFBS

No.TF2Distance
Orienta-
sion
N pairsN backgr.
Ratio
Ratio
in random
Ratio
in repeats
Z
P
FDRDistribution
1MIT_006SP1
120 - 124
-b+a
31
6
5.166
0.7
2
10.196
0
0
2ADD_SMAD3B
15 - 19
+b+a
659
187.5
3.514
0
2.1
9.51
0
0
3TF_PAX2
15 - 19
-b+a
42
11.6
3.62
1.1
0.7
7.12
0
0
4MIT_041MEIS
10 - 14
+b+a
76
26.7
2.846
0.7
0.9
6.273
0
0
5MIT_092
5 - 9
-b+a
39
9.8
3.979
1.7
1.8
5.905
0
0
6TF_MEIS
10 - 14
+b+a
83
36
2.305
0.8
1.1
5.965
0
0
7TF_MYB
5 - 9
+a-b
31
11
2.818
1.1
1.6
4.587
0
0
8TF_SP1
120 - 124
-b+a
31
9.1
3.406
0.7
1.6
4.485
0.0003
0.0006

Legend