CisView Mouse (mm6, March 2005)

Overlap of ADD_TANTIGEN with other TFBS

No.TF2N overlapOverlap, %Overlap in
random seq., %
Abundance
of ADD_TANTIGEN
Abundance
of TF2
1ADD_TANTIGEN
2426
55.29
0
4387
4387
2TF_LYF
233
5.31
1.77
4387
33146

Over-represented distances with other TFBS

No.TF2Distance
Orienta-
sion
N pairsN backgr.
Ratio
Ratio
in random
Ratio
in repeats
Z
P
FDRDistribution
1ADD_LRH
20 - 24
+b+a
66
5.4
12.222
1.6
10.5
21.553
0
0

Repeat-based over-represented distances with other TFBS

No.TF2Distance
Orienta-
sion
N pairsN backgr.
Ratio
Ratio
in random
Ratio
in repeats
Z
P
FDRDistribution
1ADD_HOGNESS
25 - 29
+a+b
300
5
60
0
839.2
208.383
0
0
2ADD_PITX
20 - 24
+a+b
336
6.1
55.081
0
207.3
184.585
0
0
3MIT_093PITX
20 - 24
-b+a
333
6.1
54.59
0
206
182.907
0
0
4ADD_FXRDR3
55 - 59
+b+a
158
3.8
41.578
0
185.3
73.205
0
0
5TF_STAT
50 - 54
+a-b
198
2.7
73.333
0
180.2
58.009
0
0
6MIT_013LEF
40 - 44
+a-b
111
4.2
26.428
2.5
77.6
53.678
0
0
7TF_STAF
35 - 39
-b+a
38
1.2
31.666
0
164.1
50.383
0
0
8TF_AHR
25 - 29
-b+a
184
4.9
37.551
0.9
233.8
43.084
0
0
9ADD_TEF1
25 - 29
+b+a
63
5.1
12.352
1.6
215.8
42.985
0
0
10MIT_031
40 - 44
+b+a
93
1.9
48.947
0
394.8
41.659
0
0
11ADD_SF1A
20 - 24
+b+a
52
2.4
21.666
0
59.2
31.357
0
0
12ADD_HMG
35 - 39
+b+a
103
6.7
15.373
0.6
38.5
28.972
0
0
13TF_AML
35 - 39
+b+a
36
2.8
12.857
0
100.7
23.186
0
0
14ADD_GCNF
20 - 24
+b+a
86
5.9
14.576
0
29.9
19.021
0
0
15NCBI_003
15 - 19
+a-b
160
9.8
16.326
0
460.8
7.558
0
0

Legend