Overlap of MIT_002MYC with other TFBS and distance distribution

CisView Mouse (mm6, March 2005)

Overlap of MIT_002MYC with other TFBS

No.	TF2	N overlap	Overlap, %	Overlap in random seq., %	Abundance of MIT_002MYC	Abundance of TF2
1	TF_MYC	12880	98.12	98.85	13126	35845
2	TF_ATF6	12879	98.11	98.85	13126	58346
3	TF_ARNT	12879	98.11	98.86	13126	57765
4	TF_HTF	11590	88.29	91.88	13126	57741
5	TF_CREB	5097	38.83	36.87	13126	63477
6	TF_SREBP1	2732	20.81	19.06	13126	47793
7	TF_ATF1	2654	20.21	17.17	13126	62873
8	MIT_140	723	5.5	6.1	13126	27757

Over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	TF_HMX	40 - 44	-b+a	59	12.8	4.609	1.1	0.9	12.796	0	0
2	ADD_MTF1A	5 - 9	-b+a	157	24.3	6.46	1.8	5.5	12.566	0	0
3	MIT_140	50 - 54	-b+a	50	13.3	3.759	1.1	0.9	9.224	0	0
4	TF_NFY	15 - 19	+a+b	48	18.3	2.622	1.1	1.5	8.378	0	0
5	TF_MSX	35 - 39	-b+a	46	9.7	4.742	1	1.9	8.222	0	0
6	MIT_096	30 - 34	+a+b	39	3	13	0.5	1	7.607	0	0
7	TF_MYB	5 - 9	+b+a	36	12.8	2.812	1.3	1.8	5.674	0	0
8	TF_SREBP1	20 - 24	-b+a	56	22.7	2.466	0.9	0.4	4.449	0	0.0001
9	TF_ETS	135 - 139	+a+b	31	13.8	2.246	1	0.6	3.602	0.017	0.0299

Repeat-based over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	TF_HNF4	95 - 99	-b+a	32	12	2.666	0.9	3.1	5.033	0	0

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