CisView Mouse (mm6, March 2005)

Overlap of MIT_005NFY with other TFBS

No.TF2N overlapOverlap, %Overlap in
random seq., %
Abundance
of MIT_005NFY
Abundance
of TF2
1TF_COMP
8512
52.23
50.83
16295
37534
2TF_PBX
4895
30.03
20.46
16295
76486
3TF_NF1
2317
14.21
13.95
16295
50547
4TF_CEBP
1947
11.94
8.57
16295
51516
5MIT_046
1493
9.16
5.58
16295
21360
6TF_GFI
1033
6.33
2.77
16295
56069

Over-represented distances with other TFBS

No.TF2Distance
Orienta-
sion
N pairsN backgr.
Ratio
Ratio
in random
Ratio
in repeats
Z
P
FDRDistribution
1TF_NFY
30 - 34
+a-b
178
52.1
3.416
1.1
0.4
12.846
0
0
2MIT_005NFY
30 - 34
+a+b
101
28.7
3.519
1.1
0.3
8.848
0
0
3TF_ER
110 - 114
-b+a
35
13.4
2.611
0.9
0.7
7.72
0
0
4MIT_006SP1
20 - 24
+a+b
97
37.6
2.579
0.9
0.9
6.686
0
0
5TF_MZF
100 - 104
-b+a
30
11.8
2.542
0.8
0.7
6.649
0
0
6TF_HAND
100 - 104
+b+a
30
9.3
3.225
0.8
1.1
6.543
0
0
7TF_NKX
95 - 99
+b+a
32
11.1
2.882
0.9
0.4
5.633
0
0
8ADD_PAX8
15 - 19
+b+a
63
30.5
2.065
1
0.8
3.774
0.0009
0.0017
9TF_XVENT
30 - 34
+a+b
39
17.8
2.191
1.5
1.1
3.845
0.0014
0.0026
10TF_COMP
30 - 34
+a+b
71
34.5
2.057
0.9
1.5
3.778
0.0018
0.0034

Repeat-based over-represented distances with other TFBS

No.TF2Distance
Orienta-
sion
N pairsN backgr.
Ratio
Ratio
in random
Ratio
in repeats
Z
P
FDRDistribution
1MIT_101
5 - 9
+a-b
47
15.1
3.112
1.4
27.5
7.027
0
0
2TF_P300
5 - 9
-b+a
31
11.4
2.719
0.6
39.1
6.398
0
0
3MIT_036FOXO
90 - 94
+a-b
37
12.2
3.032
0.9
33.3
6.449
0
0
4TF_SRY
85 - 89
+a-b
47
23
2.043
1.2
17.2
6.301
0
0
5ADD_FOXJ1
85 - 89
+b+a
53
25.2
2.103
1.3
16.2
6.135
0
0
6TF_FOXO
90 - 94
+a-b
42
15.4
2.727
1
21.8
5.232
0
0

Legend