Overlap of MIT_007AP1 with other TFBS and distance distribution

CisView Mouse (mm6, March 2005)

Overlap of MIT_007AP1 with other TFBS

No.	TF2	N overlap	Overlap, %	Overlap in random seq., %	Abundance of MIT_007AP1	Abundance of TF2
1	TF_MAF	20392	56.82	54.49	35884	43949
2	ADD_MAF	11842	33	34.3	35884	23195
3	MIT_032MAF	3043	8.48	8.42	35884	4476
4	TF_ARP1	2340	6.52	4.94	35884	48243

Over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	ADD_TEL	5 - 9	+a+b	36	11	3.272	1.2	0.5	4.461	0	0

Repeat-based over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	MIT_011GABP	5 - 9	+a-b	54	13.2	4.09	1.8	5.4	6.684	0	0

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