Overlap of MIT_011GABP with other TFBS and distance distribution

CisView Mouse (mm6, March 2005)

Overlap of MIT_011GABP with other TFBS

No.	TF2	N overlap	Overlap, %	Overlap in random seq., %	Abundance of MIT_011GABP	Abundance of TF2
1	TF_ETS	3866	34.76	29.69	11120	45987
2	TF_GABP	2978	26.78	31.11	11120	39373
3	MIT_016ETS	2902	26.09	20.2	11120	35744
4	ADD_TEL	2853	25.65	20.31	11120	8756
5	ADD_PU1	2517	22.63	20.97	11120	101868
6	TF_ELK	2067	18.58	26.48	11120	53589
7	MIT_050PU1	1787	16.07	12.97	11120	18987
8	MIT_003ELK	1448	13.02	17.83	11120	7204

Over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	MIT_029	5 - 9	-b+a	36	8.1	4.444	1.5	1.6	8.907	0	0
2	MIT_042	5 - 9	+a+b	76	12	6.333	3	5.4	8.253	0	0
3	TF_OLF1	80 - 84	+b+a	30	11.4	2.631	1	1.3	5.264	0	0
4	MIT_011GABP	20 - 24	+a+b	42	18.5	2.27	1.3	2	3.791	0.0012	0.0022

Repeat-based over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	MIT_007AP1	5 - 9	+a-b	54	13.2	4.09	1.8	5.4	6.684	0	0

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