Overlap of MIT_015AP4 with other TFBS and distance distribution

CisView Mouse (mm6, March 2005)

Overlap of MIT_015AP4 with other TFBS

No.	TF2	N overlap	Overlap, %	Overlap in random seq., %	Abundance of MIT_015AP4	Abundance of TF2
1	TF_AP4	44777	74.02	74.6	60486	44815
2	TF_HEN1	22433	37.08	37.32	60486	40080
3	MIT_035MYOD	8572	14.17	12.39	60486	37060
4	MIT_101	4136	6.83	5.24	60486	41156
5	TF_MEIS	3356	5.54	3.29	60486	79728
6	TF_TGIF	3181	5.25	2.96	60486	52432
7	MIT_041MEIS	3114	5.14	2.77	60486	39993

Over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	MIT_054MEF2	50 - 54	+b+a	39	7.6	5.131	0.9	1	11.669	0	0
2	MIT_145	5 - 9	-b+a	73	26.9	2.713	1.1	1.2	10.138	0	0
3	MIT_154	55 - 59	+b+a	32	13.1	2.442	1	0.5	4.013	0.0013	0.0024

Repeat-based over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	MIT_096	5 - 9	+b+a	32	9.2	3.478	1.6	3.9	5.8	0	0

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