CisView Mouse (mm6, March 2005)

Overlap of MIT_019 with other TFBS

No.TF2N overlapOverlap, %Overlap in
random seq., %
Abundance
of MIT_019
Abundance
of TF2
1ADD_WHN
1977
10.12
11.92
19517
48712
2TF_ATF1
1952
10
10.64
19517
62873
3TF_CREB
1724
8.83
9
19517
63477
4TF_HTF
984
5.04
5.54
19517
57741

Over-represented distances with other TFBS

No.TF2Distance
Orienta-
sion
N pairsN backgr.
Ratio
Ratio
in random
Ratio
in repeats
Z
P
FDRDistribution
1ADD_NANOG
135 - 139
+a+b
38
8.1
4.691
1.1
1.1
14.208
0
0
2TF_TAL1
135 - 139
+b+a
36
10.6
3.396
0.9
0.9
10.728
0
0
3TF_HLF
35 - 39
+a+b
53
15.5
3.419
1
1.1
9.719
0
0
4ADD_HELIOS
50 - 54
+a-b
45
11.5
3.913
0.9
0.7
9.078
0
0
5MIT_044OCT
40 - 44
+a+b
33
6.3
5.238
1.2
1.9
9.047
0
0
6MIT_013LEF
125 - 129
+b+a
57
21.8
2.614
1.1
1.7
8.383
0
0
7TF_XVENT
40 - 44
+a-b
37
12.1
3.057
1
1.2
8.165
0
0
8ADD_OCT4A
80 - 84
+b+a
37
12.1
3.057
1.1
0.3
7.881
0
0
9TF_MYC
10 - 14
+b+a
58
19.3
3.005
1.1
1.2
7.576
0
0
10MIT_027
35 - 39
+a+b
34
9.5
3.578
0.8
0.7
7.563
0
0
11TF_COUP
25 - 29
+a-b
56
20.9
2.679
0.8
1.1
7.23
0
0
12TF_STAF
135 - 139
+b+a
36
10.3
3.495
1
1
7.4
0
0
13MIT_017IRF
120 - 124
+b+a
46
19.1
2.408
1
0.8
6.366
0
0
14TF_LHX
120 - 124
-b+a
43
16.7
2.574
1.1
1.1
6.284
0
0
15TF_MZF
50 - 54
+a-b
41
15.6
2.628
0.9
0.8
5.744
0
0
16TF_S8
120 - 124
-b+a
40
19.5
2.051
1.2
0.8
5.764
0
0
17MIT_041MEIS
120 - 124
+a-b
31
11.6
2.672
0.7
1.4
5.752
0
0
18TF_LYF
35 - 39
+a-b
35
12.3
2.845
0.9
0.4
5.418
0
0
19ADD_AR
40 - 44
+b+a
36
14
2.571
1
1.7
5.427
0
0
20TF_CHX
105 - 109
+b+a
35
17.4
2.011
1.1
1.5
4.637
0.0001
0.0002
21TF_OCT
115 - 119
+b+a
37
16.5
2.242
0.6
0.9
3.527
0.0193
0.0337

Repeat-based over-represented distances with other TFBS

No.TF2Distance
Orienta-
sion
N pairsN backgr.
Ratio
Ratio
in random
Ratio
in repeats
Z
P
FDRDistribution
1TF_POU3F
40 - 44
+a+b
44
15.7
2.802
1.1
17.1
5.418
0
0
2TF_YY1
75 - 79
+a-b
34
13.3
2.556
0.9
2.8
5.512
0
0

Legend