Overlap of MIT_020E4F1 with other TFBS and distance distribution

CisView Mouse (mm6, March 2005)

Overlap of MIT_020E4F1 with other TFBS

No.	TF2	N overlap	Overlap, %	Overlap in random seq., %	Abundance of MIT_020E4F1	Abundance of TF2
1	TF_ATF1	6450	97.87	94.27	6590	62873
2	TF_CREB	6436	97.66	94.24	6590	63477
3	TF_HTF	3743	56.79	48.39	6590	57741
4	TF_ATF6	3661	55.55	38.52	6590	58346
5	TF_TAXCREB1	1966	29.83	31.4	6590	17854
6	TF_ARNT	1335	20.25	18.39	6590	57765
7	MIT_070PAX3	1072	16.26	16.45	6590	1741
8	TF_MAF	818	12.41	9.82	6590	43949
9	MIT_009ATF	776	11.77	1.88	6590	9256
10	MIT_014ATF1	775	11.76	1.9	6590	1373
11	MIT_019	461	6.99	6.3	6590	19517
12	TF_SREBP1	418	6.34	5.5	6590	47793
13	ADD_PAX8	381	5.78	6.96	6590	50305
14	TF_AHR	361	5.47	7.31	6590	61354
15	ADD_LXR2	341	5.17	3.53	6590	23741
16	TF_SREBP	334	5.06	6.99	6590	54277
17	TF_PAX2	333	5.05	4.36	6590	48376

Over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	MIT_003ELK	5 - 9	+a+b	92	6.7	13.731	1.7	0	20.773	0	0
2	TF_GABP	5 - 9	+b+a	125	18.1	6.906	1.2	2.1	17.664	0	0
3	TF_ETS	5 - 9	+b+a	88	15	5.866	1.3	1.8	15.134	0	0
4	TF_ELK	5 - 9	+b+a	122	27.8	4.388	0.9	1.5	14.108	0	0
5	TF_NFY	15 - 19	-b+a	46	12.2	3.77	1.1	0.8	7.205	0	0
6	MIT_092	5 - 9	+a-b	32	6.4	5	1.6	1.1	7.024	0	0
7	MIT_016ETS	5 - 9	-b+a	33	9.9	3.333	1.4	1.8	2.942	0.0065	0.0117

Repeat-based over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	MIT_060FOXO	60 - 64	-b+a	34	14	2.428	1.3	22	4.78	0	0

Legend