Overlap of MIT_029 with other TFBS and distance distribution

CisView Mouse (mm6, March 2005)

Overlap of MIT_029 with other TFBS

No.	TF2	N overlap	Overlap, %	Overlap in random seq., %	Abundance of MIT_029	Abundance of TF2
1	MIT_017IRF	4943	9.32	6.63	53030	81737
2	TF_MEF2	4123	7.77	4.2	53030	70569
3	ADD_PIT	3718	7.01	4.57	53030	353844
4	MIT_082	3412	6.43	5.3	53030	22904
5	TF_BARBIE	3333	6.28	6.66	53030	51858
6	TF_MSX	3199	6.03	6.17	53030	40102

Over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	MIT_169	55 - 59	+a-b	52	11.9	4.369	1	1.5	9.747	0	0
2	MIT_011GABP	5 - 9	-b+a	36	8.1	4.444	1.5	1.6	8.907	0	0
3	MIT_152	20 - 24	+a+b	79	28.6	2.762	0.9	1.2	7.006	0	0
4	MIT_141HSF	40 - 44	+a+b	31	12.4	2.5	1	0.8	5.262	0	0
5	ADD_FXRDR1	45 - 49	-b+a	39	18.3	2.131	0.8	0.5	4.755	0	0
6	MIT_129	45 - 49	+a-b	44	20.4	2.156	0.9	0.9	4.501	0.0001	0.0002

Repeat-based over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	TF_P300	5 - 9	+a+b	85	32	2.656	1.2	3	7.526	0	0

Legend