Overlap of MIT_041MEIS with other TFBS and distance distribution

CisView Mouse (mm6, March 2005)

Overlap of MIT_041MEIS with other TFBS

No.	TF2	N overlap	Overlap, %	Overlap in random seq., %	Abundance of MIT_041MEIS	Abundance of TF2
1	TF_MEIS	39769	99.43	93.9	39993	79728
2	TF_TGIF	21998	55	45.15	39993	52432
3	TF_MEISHOX	17150	42.88	35.55	39993	54810
4	TF_MYB	5324	13.31	10.83	39993	36961
5	MIT_015AP4	3128	7.82	5.85	39993	60486
6	TF_PAX2	2847	7.11	6.58	39993	48376
7	TF_AP4	2405	6.01	4.45	39993	44815
8	MIT_012MYOD	2110	5.27	4.71	39993	70740

Over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	ADD_SMAD3B	10 - 14	+b+a	76	26.7	2.846	0.7	0.9	6.273	0	0
2	MIT_019	120 - 124	+a-b	31	11.6	2.672	0.7	1.4	5.752	0	0
3	MIT_136	20 - 24	-b+a	32	10.8	2.962	0.9	0.9	5.387	0	0
4	MIT_168	20 - 24	-b+a	34	14.6	2.328	0.7	0.3	4.74	0	0

Repeat-based over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	MIT_010YY1	70 - 74	+a+b	32	3.4	9.411	1.1	108.2	13.365	0	0
2	TF_E2F	10 - 14	-b+a	45	13.9	3.237	1	59.7	7.051	0	0
3	MIT_067TCF11	35 - 39	+a+b	40	14.6	2.739	0.9	38.3	7.036	0	0
4	MIT_081	10 - 14	+a+b	42	13.5	3.111	0.9	95.6	6.332	0	0
5	MIT_035MYOD	85 - 89	+a-b	70	33.7	2.077	1.1	19.6	5.296	0	0
6	MIT_140	50 - 54	+a+b	53	24.6	2.154	1	21.3	4.658	0	0.0001

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