Overlap of MIT_049SOX with other TFBS and distance distribution

CisView Mouse (mm6, March 2005)

Overlap of MIT_049SOX with other TFBS

No.	TF2	N overlap	Overlap, %	Overlap in random seq., %	Abundance of MIT_049SOX	Abundance of TF2
1	ADD_HMG	10858	57.85	48.44	18769	153281
2	TF_SOX9	10827	57.68	49.43	18769	65322
3	MIT_060FOXO	6961	37.08	28.69	18769	148519
4	ADD_PIT	2295	12.22	7.66	18769	353844
5	TF_CEBP	1687	8.98	7.73	18769	51516
6	TF_FOXO	1637	8.72	6.27	18769	61084
7	MIT_144	1356	7.22	5.97	18769	20837
8	MIT_132	1347	7.17	6.32	18769	21678
9	MIT_046	1259	6.7	7.36	18769	21360
10	TF_HFH	1108	5.9	4.13	18769	70651
11	TF_FOXD	1007	5.36	3.51	18769	93909

Over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	MIT_131GATA	5 - 9	+a-b	34	6.4	5.312	1.8	1.2	11.908	0	0
2	TF_CDC5	110 - 114	+a+b	43	15.9	2.704	0.8	2.2	7.718	0	0
3	TF_STAT	65 - 69	+a-b	47	21	2.238	1.3	1.2	5.951	0	0
4	TF_COMP	85 - 89	+b+a	31	12.3	2.52	1	0.8	5.358	0	0
5	ADD_GAS	60 - 64	+b+a	38	15.3	2.483	0.8	0.7	4.963	0	0
6	MIT_049SOX	80 - 84	+b+a	33	11.4	2.894	1.5	1.6	4.672	0	0.0001
7	MIT_174	50 - 54	+a+b	58	27	2.148	0.3	0.6	4.095	0.0008	0.0015

Repeat-based over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	TF_AML	85 - 89	-b+a	57	23.4	2.435	1.1	2.8	5.788	0	0

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