CisView Mouse (mm6, March 2005)

Overlap of MIT_111AML with other TFBS

No.TF2N overlapOverlap, %Overlap in
random seq., %
Abundance
of MIT_111AML
Abundance
of TF2
1TF_AML
20108
97.78
93.52
20563
68750
2ADD_AIRE
1459
7.09
6.11
20563
45317

Over-represented distances with other TFBS

No.TF2Distance
Orienta-
sion
N pairsN backgr.
Ratio
Ratio
in random
Ratio
in repeats
Z
P
FDRDistribution
1MIT_101
125 - 129
+a-b
34
10.6
3.207
1.1
1.1
9.234
0
0
2ADD_HOXA4
5 - 9
+a+b
34
8.7
3.908
1.8
0.9
6.427
0
0
3TF_CDC5
15 - 19
+a+b
45
16.7
2.694
1.1
1
6.444
0
0
4TF_COMP
30 - 34
+a+b
40
15.1
2.649
0.7
1.9
6.425
0
0
5TF_ZIC
65 - 69
+a-b
38
17.5
2.171
1.2
0.8
4.507
0.0001
0.0003

Legend