CisView Mouse (mm6, March 2005)

Overlap of NCBI_003 with other TFBS

No.TF2N overlapOverlap, %Overlap in
random seq., %
Abundance
of NCBI_003
Abundance
of TF2

Repeat-based over-represented distances with other TFBS

No.TF2Distance
Orienta-
sion
N pairsN backgr.
Ratio
Ratio
in random
Ratio
in repeats
Z
P
FDRDistribution
1ADD_PITX
40 - 44
+a-b
133
1
133
0
482.9
131.276
0
0
2MIT_093PITX
40 - 44
+b+a
132
1
132
0.9
474
130.282
0
0
3ADD_HOGNESS
45 - 49
+a-b
130
1
130
0
455.6
93.668
0
0
4ADD_FXRDR3
35 - 39
-b+a
95
1.5
63.333
0
1661.8
59.806
0
0
5TF_AHR
45 - 49
+a+b
96
2.3
41.739
0.1
385
58.59
0
0
6MIT_013LEF
20 - 24
+a+b
62
2
31
0.8
338.7
53.918
0
0
7TF_HMX
30 - 34
+a+b
73
1.3
56.153
0
341.4
52.337
0
0
8TF_STAT
30 - 34
+b+a
120
2.1
57.142
0.7
236.4
48.977
0
0
9TF_LYF
25 - 29
+a-b
87
1.3
66.923
0
332.9
47.841
0
0
10TF_E47
10 - 14
+a-b
41
1
41
2.6
265.7
40.05
0
0
11ADD_HMG
20 - 24
-b+a
61
2.7
22.592
0.8
227.1
33.398
0
0
12MIT_012MYOD
10 - 14
+a-b
47
3
15.666
1.7
256.4
16.802
0
0
13ADD_TANTIGEN
15 - 19
+a-b
160
9.8
16.326
0
460.8
7.558
0
0

Legend