Overlap of TF_CDX with other TFBS and distance distribution

CisView Mouse (mm6, March 2005)

Overlap of TF_CDX with other TFBS

No.	TF2	N overlap	Overlap, %	Overlap in random seq., %	Abundance of TF_CDX	Abundance of TF2
1	ADD_PIT	7386	21.43	11.7	34460	353844
2	TF_POU6F	5169	15	10.84	34460	70834
3	MIT_134	3002	8.71	10.33	34460	11947
4	ADD_FOXP1	2012	5.83	3.98	34460	74510
5	TF_PBX	1925	5.58	3.22	34460	76486
6	TF_POU3F	1783	5.17	2.83	34460	78035

Over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	MIT_009ATF	5 - 9	+b+a	49	8.3	5.903	2.8	4.7	8.603	0	0
2	TF_AP2A	90 - 94	+b+a	33	15.5	2.129	1.2	0.9	5.145	0	0

Legend